FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14517770
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA43450.09.6105497
ACACTAT45850.08.6364128
CACTATA47800.07.8322039
GTGAGTG36550.06.89725261
CTAGCGA11400.06.0635657115-119
GAGTGAT56100.06.03239633
TGAGTGA49750.05.78976152
AAACACT75600.05.61887266
GCTAGCG14150.05.1904554115-119
Produced by FastQC (version 0.11.5)