FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16311609
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC143100.040.6037759
TGGCTCA141650.039.7486766
GGCTCAA145350.038.7863737
ATGGCTC143400.038.5606655
TCTGATG175300.031.3793491
GCTCAAA200200.028.5194828
GATGGCT200700.027.5874444
CTGATGG269700.020.8231352
TGATGGC290900.019.6768653
CCTCTAG24600.016.27317250-54
CTCGGGT77600.014.30721620-24
CTCTAGG21700.013.00645250-54
GGTCCTC107100.010.68907545-49
AGGTCCT110850.010.47036645-49
CTAGGAT27600.010.43478350-54
TCGGGTG115950.010.02225125-29
AACACAG122200.09.98101510-14
GGGTGGG119100.09.64836225-29
ACACAGC128700.09.55524410-14
TAGCATG44200.09.4479648
Produced by FastQC (version 0.11.5)