FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18877373
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA54550.018.0793349
GCCACTC79150.012.5511868
AGCCACT100350.010.401777
AAGCCAC103850.010.3977986
AACACTA63700.07.91070567
CTCACTA32650.07.09938215-19
ACACTAT75900.06.8288468
TACAAAG176950.06.51459462
GGCCTAA35000.06.50048275-79
ACAAAGC184150.06.2990073
CACTATA89400.05.5560769
ACTCACT47050.05.293761315-19
CCCTTAA84650.05.187424
GGGGCCC47200.05.185793105-109
AATTACG103500.05.1347681
GGGCCCC47800.05.0002995110-114
Produced by FastQC (version 0.11.5)