FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16760735
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG39200.012.3052658
GTGAGTA38300.08.6557732
TAAGGGG40500.08.5327399
CCTTTAG67000.08.4895444
TTAGCAT68900.07.94139157
AGTGAGT42500.07.81323531
GTCCCTT84450.06.7528871
CTTTAGC87450.06.5863985
CCCTTTA94550.05.9453843
TTTAGCA104600.05.7818316
Produced by FastQC (version 0.11.5)