FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14429666
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAATTC105550.012.3446024
TAATTCA62950.09.263045
CATATAA85550.07.3159061
TAATTCG37100.06.59734635
TGCATAA80850.06.30097441
GGGGGGG41750.06.10100361
CCAAATT61650.05.9598533
ACCAAAT63000.05.83214242
TATAATT107850.05.61122473
GAGCACA130900.05.4445049
TAATTCT80050.05.3957795
TAATTCC70350.05.1164675
Produced by FastQC (version 0.11.5)