FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15582114
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTTAA44800.06.91011334
CCTAGAC11400.06.820958120-124
CTAGACC12400.06.73539120-124
CTAAGAG23751.5904152E-76.3658238
CCCTAAG27955.502461E-75.66682436
GTTACGT66650.05.45002271
TACGTTA62900.05.38065673
ACCACTA72900.05.2341638
ACCCTAA42906.7575456E-95.03457555
Produced by FastQC (version 0.11.5)