FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13608099
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG53250.07.5964021
TGAGTGA54400.07.2839962
GAGTGAT64100.06.7436893
GATCGGA129100.06.2665911
CTAGATC9103.6379788E-115.3799286140-144
GAGCACA167350.05.2055179
AGTGATG99700.05.1274064
AGCTAAC19750.00363616135.10382184
Produced by FastQC (version 0.11.5)