FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12725524
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG36050.08.9912731
GATCGGA122300.08.1865751
AGAGCGT130500.07.44790368
GAGTGAT56250.07.1682893
TGAGTGA51300.07.01848942
GAGCGTC147750.06.87069569
AAGAGCG165750.05.99427037
ATCGGAA197250.05.73157072
TCGGAAG180850.05.6933463
AGTGATG86100.05.60252954
TAGATCT38650.05.476483340-44
GAAGAGC200050.05.18246566
Produced by FastQC (version 0.11.5)