FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15643833
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA152650.010.2099351
AGAGCGT186700.07.94322068
GAGCGTC210300.07.42840539
TCGGAAG223400.06.99372633
AAGAGCG229050.06.6945547
ATCGGAA252900.06.6407062
AGTGTAG51850.06.081010340-44
GAAGAGC262250.06.06704046
TAGATCT55450.05.84199740-44
GGAAGAG275950.05.5832045
Produced by FastQC (version 0.11.5)