FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13114839
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG36450.012.0596761
TGAGTGA55100.08.2350952
GAGTGAT62450.07.49376343
AGAGCGT147400.06.7404018
GATCGGA150650.06.55322031
GAGCGTC179200.05.66502439
AAGAGCG181100.05.6451317
TCGGAAG184700.05.496313
AGTGATG86400.05.3330864
ATCGGAA211300.05.1129492
Produced by FastQC (version 0.11.5)