FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17430420
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA166400.010.6921711
GAGCACA172150.010.495679
AGAGCAC179150.010.085578
TCGGAAG217000.08.6004233
ATCGGAA240300.08.0063992
AAGAGCA300900.06.22006137
AGTCACA58900.05.54932125-29
GGAAGAG371950.05.3802665
CGGAAGA369400.05.34482434
CAGTCAC75650.05.043897625-29
Produced by FastQC (version 0.11.5)