FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17430420
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA169550.010.6045961
TCGGAAG226500.07.89180563
AGAGCGT228600.07.6517938
ATCGGAA240450.07.47124622
TAGTGTA52950.06.82470135-39
GAGCGTC275350.06.58792459
AAGAGCG280900.06.45777947
TAGATCT61350.06.00808640-44
AGTGTAG69150.05.496958740-44
GGAAGAG369650.05.3552245
CGGAAGA372900.05.29603774
ATAGTGT71400.05.24265235-39
Produced by FastQC (version 0.11.5)