FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183404

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183404
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16100922
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTG52400.015.1621481
TGAGTGA72450.011.6337182
GAGTGAT82500.010.8277313
GAGCACA139850.010.6564999
AGAGCAC146100.010.3486538
GATCGGA176200.08.8131661
AGTGATG119550.07.6486554
TCGGAAG214800.07.27771763
AAGAGCA226350.07.1249577
ATCGGAA253600.06.87443732
ATGGTTG125200.06.7281598
GGGGGGG43300.06.48855162
GATGGTT142700.06.45804077
TGGTTGA140550.06.45425849
GAAGAGC261500.05.97451646
TAGTGTG31500.05.805375615-19
GGAAGAG316900.05.04365635
Produced by FastQC (version 0.11.5)