FastQCFastQC Report
Sat 11 May 2024
EGAF00005183407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14408640
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG488530.33905351233704223No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA343740.23856519421680322No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA249750.17333349990005997No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)