FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19496291
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA95700.016.7755325
CAGTGGT104900.014.9616284
AGCAGTG153500.011.2591162
GTGGTAT149550.011.07193856
GTATCAA154500.010.8103999
GCAGTGG169000.09.75758653
TGGTATC165800.09.6394157
GGTATCA178350.09.1225788
AAGCAGT217100.08.2001151
Produced by FastQC (version 0.11.5)