FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183504

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183504
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14898667
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA61150.027.0768537
ACACTAT65500.025.6084298
CACTATA67300.024.7095729
AAACACT102500.016.5756666
CAAACAC104150.016.2447055
ACCAAAC111000.014.8531543
CCAAACA123200.013.849814
GCCCTTA61300.012.2145954
TAGCCCT66450.011.4845922
TACCAAA169900.010.5937892
TATTTAG77500.09.7533969
CCCTAAA51600.09.2982171
ATACCAA200550.09.1707171
CCCTTAT101900.07.91310835
GTAGCCC104200.07.25556231
AGCCCTT121900.06.79204133
CTATAGC57950.06.660668410-14
CCTTATT130450.06.5672836
CCCCTCA57050.06.511403685-89
GTACTAA59200.06.49366130-34
Produced by FastQC (version 0.11.5)