FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14898667
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA61000.024.3188137
ACACTAT63400.023.279258
CACTATA68950.021.2962939
AAACACT100100.015.1165086
CAAACAC110500.013.8894975
ACCAAAC110150.013.5415883
GCCCTTA64550.012.2794864
CCAAACA125150.012.0912784
TAGCCCT68800.011.8365032
CCCTAAA51000.010.6399511
TATTTAG78150.010.3156649
TACCAAA168800.09.5206342
ATACCAA199800.08.661531
CCCTTAT104250.08.4324345
GTAGCCC105300.07.45132451
AGCCCTT121600.07.2295293
TTACCCT89400.06.8436789
CCTTATT137200.06.4597736
ATTACCC101450.06.24503668
CCCCTCA57850.06.023962585-89
Produced by FastQC (version 0.11.5)