FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14993260
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAG22350.011.2823566
CTAAGAG26450.09.5334848
TACCCTA32850.08.5559654
CCTAAGA34450.07.94700867
ACCCTAA34750.07.46374855
GTACCCT53550.05.6512633
TGTACCC59150.05.3577342
TAAGAGC52001.8189894E-125.2648939
Produced by FastQC (version 0.11.5)