FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15161381
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT77850.014.426464
AGTGGTA82400.013.8919675
AGCAGTG113950.010.8072342
GCAGTGG127950.09.624543
GTGGTAT119700.09.5630596
TGGTATC145600.08.50476557
AAGCAGT159850.08.2864831
GTATCAA151500.08.2685999
GGTATCA153550.08.11132058
Produced by FastQC (version 0.11.5)