FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13921093
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT41350.014.625328
AACACTA42700.014.5032687
CACTATA51600.011.7172339
AAACACT74700.08.7775286
GCCCTTA55150.07.96987254
CAAACAC81300.07.71040155
TAGCCCT62200.06.8355342
TATTTAG67800.05.94502649
CCCTTAT84500.05.45722155
ACCAAAC87400.05.35881763
CCAAACA83450.05.0080514
Produced by FastQC (version 0.11.5)