FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18334533
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT93800.025.0218944
AGTGGTA101250.023.0374345
AGCAGTG132200.017.7042752
GTGGTAT143800.016.8214916
GCAGTGG158700.015.1558123
TGGTATC173000.014.1903267
GGTATCA174550.014.1880498
AAGCAGT189200.013.1573371
GTATCAA186800.013.0263859
Produced by FastQC (version 0.11.5)