FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14668928
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA119900.010.0251331
GAGCGTC120800.09.8352249
AGAGCGT136600.08.8107078
AAGAGCG169800.07.4275717
TCGGAAG216550.06.19021373
GAAGAGC224150.06.04453136
TAGATCT43750.05.72594640-44
ATCGGAA236600.05.60384132
AGGCCTC44852.3646862E-115.46339947
Produced by FastQC (version 0.11.5)