FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14012360
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACACA59900.013.700735
AAGGTAC68900.012.5388792
TACACAA64250.012.4369976
GGTACAC76500.011.4805874
AGGTACA78750.010.969743
ACACAAA103050.08.1035577
AAAGGTA118150.08.0853461
CTAACAC22250.07.700321755-59
GCTAACA30400.06.441201750-54
CACAAAG154850.06.1831648
ACAAAGC160850.06.04175239
TGCTAAC30200.05.86407850-54
TAACACT36300.05.15625745-49
Produced by FastQC (version 0.11.5)