FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12619955
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA63100.026.2419515
CAGTGGT66500.024.6838324
GTATCAA102600.018.5942639
AGCAGTG94650.017.9529382
GGTATCA111200.017.3506458
GTGGTAT96350.017.334926
TGGTATC116050.016.2533077
GCAGTGG111250.014.6905813
AAGCAGT124950.013.9206431
TCTTGGG83450.05.05705535-39
Produced by FastQC (version 0.11.5)