FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14106221
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA69100.011.7725876
CAACACT65900.011.5795575
ACACTAT65350.011.5668547
ACTATAG73200.010.7198069
CACTATA72250.010.2629188
TAACAAC81250.09.4832052
ACAACAC97450.08.6430354
GCCCTTA65150.05.30382444
TAGCCCT66050.05.1241252
ATAACAA158650.05.0686031
AACAACA177050.05.04336553
Produced by FastQC (version 0.11.5)