FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12719919
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA54550.019.400735
CAGTGGT59600.018.7233124
GTGGTAT84550.012.7722186
AGCAGTG93700.012.4483042
GTATCAA102100.011.3523419
GCAGTGG104450.011.0974933
TGGTATC102550.010.74099357
GGTATCA111100.010.36799058
AAGCAGT121650.09.9447431
Produced by FastQC (version 0.11.5)