Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005183591 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12719919 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGGCTCA | 8715 | 0.0 | 11.399228 | 6 |
GGCTCAA | 9005 | 0.0 | 10.952137 | 7 |
ATGGCTC | 8810 | 0.0 | 10.2140465 | 5 |
CTCAAAC | 10475 | 0.0 | 9.690074 | 9 |
TCTGATG | 10260 | 0.0 | 8.946669 | 1 |
GATGGCT | 11595 | 0.0 | 8.383475 | 4 |
GCTCAAA | 14740 | 0.0 | 6.690909 | 8 |
CCTCTAG | 980 | 0.0 | 6.4642315 | 50-54 |
CTGATGG | 17955 | 0.0 | 5.5371594 | 2 |
CTCTAGG | 805 | 1.3387762E-9 | 5.3655677 | 50-54 |
TGATGGC | 20535 | 0.0 | 5.3297462 | 3 |