FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16801303
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA125000.013.7662826
ATGGCTC124700.013.7416645
GGCTCAA126000.013.6570267
CTCAAAC143950.012.2041339
GATGGCT163250.010.8936294
TCTGATG159850.010.7204061
GCTCAAA192500.09.4627778
CCTCTAG12550.07.113883550-54
TGATGGC272000.07.0413893
CTGATGG250600.06.83819532
CTCTAGG8550.06.73678550-54
CTCGGGT62500.05.13787620-24
Produced by FastQC (version 0.11.5)