FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14856251
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCGT13150.07.445570590-94
CCTAAAA82400.06.61675071
GCTAGCG17550.05.90785-89
TGCTAGC19850.05.440168485-89
Produced by FastQC (version 0.11.5)