FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16007457
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGTCC29700.09.6948239
CTTAGTC29800.09.662328
CTCCCTA43700.08.5656366
CCCTACT47350.07.14521938
CCTTAGT40550.06.5682337
TCCCTAC67250.05.99423077
CCTACTT85250.05.31964359
TCCTTAG60000.05.03896
Produced by FastQC (version 0.11.5)