FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18841674
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA93200.015.1402615
CAGTGGT93200.014.9857684
GTGGTAT148000.010.2152916
AGCAGTG150950.09.7325672
GCAGTGG162500.08.5088813
GGTATCA178000.08.4937488
TGGTATC172250.08.3593197
GTATCAA188400.08.02487859
AAGCAGT216900.07.4764181
Produced by FastQC (version 0.11.5)