FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15548108
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA75250.018.5610055
CAGTGGT80000.017.459454
GTGGTAT117200.012.0402676
AGCAGTG123500.011.7212422
GGTATCA127200.011.3767078
GTATCAA133300.011.1801569
TGGTATC133200.010.86424357
GCAGTGG141500.010.1792723
AAGCAGT162400.09.3113231
Produced by FastQC (version 0.11.5)