Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005183645 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14042978 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCAAAC | 9505 | 0.0 | 11.588156 | 9 |
TGGCTCA | 9740 | 0.0 | 11.530301 | 6 |
GGCTCAA | 9930 | 0.0 | 11.309681 | 7 |
ATGGCTC | 10180 | 0.0 | 10.749106 | 5 |
TCTGATG | 11535 | 0.0 | 9.643477 | 1 |
GCTCAAA | 13225 | 0.0 | 8.383011 | 8 |
GATGGCT | 14940 | 0.0 | 7.565452 | 4 |
CCTCTAG | 1000 | 0.0 | 5.9033155 | 50-54 |
CTGATGG | 22300 | 0.0 | 5.2944984 | 2 |