FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16199929
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC111750.012.0483455
TGGCTCA113000.011.9787846
GGCTCAA113100.011.9685627
CTCAAAC131650.010.5564869
GATGGCT161550.08.8703574
TCTGATG163100.08.556741
GCTCAAA179450.08.0254268
CTGATGG234450.06.2054782
TGATGGC266100.05.95440673
CTCGGGT45700.05.767477520-24
Produced by FastQC (version 0.11.5)