FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16324123
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA87050.020.8410035
CAGTGGT90250.020.023074
GTGGTAT132400.014.1374876
AGCAGTG136750.013.4285392
GTATCAA155100.012.3932829
GCAGTGG154150.011.7721463
TGGTATC160850.011.7712227
GGTATCA161900.011.6504138
AAGCAGT186350.010.56117251
CCCTAAG22807.3479896E-86.6308826
CTAAGAG27453.8831422E-75.76988558
Produced by FastQC (version 0.11.5)