FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16324123
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA120900.012.92095857
ATGGCTC122050.012.68112855
CTCAAAC136800.011.6822949
TGGCTCA138750.011.5180756
GATGGCT167650.09.6613454
GCTCAAA174250.09.5846548
TCTGATG155750.09.4697631
CTGATGG257000.06.19052
TGATGGC286800.05.94877863
CTCGGGT55850.05.51671820-24
CCTCTAG18250.05.04902250-54
Produced by FastQC (version 0.11.5)