FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17733579
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT82000.019.5787964
AGTGGTA83900.018.7921815
AGCAGTG108650.014.7800772
GTGGTAT120000.013.1388656
GCAGTGG126500.012.5236243
TGGTATC147050.011.2606317
GTATCAA156850.010.5570659
GGTATCA154050.010.5152778
AAGCAGT166500.010.3456381
Produced by FastQC (version 0.11.5)