Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005183689 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17733579 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGGCTCA | 12995 | 0.0 | 10.18763 | 6 |
ATGGCTC | 13135 | 0.0 | 9.96949 | 5 |
GGCTCAA | 13760 | 0.0 | 9.77808 | 7 |
CTCAAAC | 15435 | 0.0 | 9.556033 | 9 |
TCTGATG | 15975 | 0.0 | 8.086072 | 1 |
GATGGCT | 17325 | 0.0 | 8.056755 | 4 |
CCTCTAG | 1020 | 0.0 | 6.63209 | 50-54 |
GCTCAAA | 22880 | 0.0 | 6.4465632 | 8 |
TGATGGC | 28040 | 0.0 | 5.7477837 | 3 |
CTGATGG | 25605 | 0.0 | 5.591891 | 2 |
CTCGGGT | 4760 | 0.0 | 5.2906427 | 20-24 |
CTCTAGG | 890 | 3.2941898E-9 | 5.0133085 | 50-54 |