FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14369460
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA101800.016.6202477
TGGCTCA106200.015.5248836
ATGGCTC113250.014.8134525
CTCAAAC123650.013.6828819
GATGGCT152350.011.1599074
GCTCAAA162300.010.5135358
TCTGATG154650.010.3126211
CTGATGG202450.08.3625672
TGATGGC229200.07.826623
CTCGGGT46500.07.55586120-24
CCTCTAG13150.05.913287650-54
GGTCCTC57000.05.912558645-49
AGGTCCT67050.05.15521645-49
Produced by FastQC (version 0.11.5)