FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17737975
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC124500.018.0935655
TGGCTCA129350.017.693346
GGCTCAA134250.016.8328787
CTCAAAC160100.014.0246779
GATGGCT185550.012.2996984
TCTGATG187800.012.27088451
GCTCAAA226550.010.0702048
TGATGGC273400.08.9814473
CTGATGG273150.08.6479042
CCTCTAG13300.07.89914150-54
GGTCCTC66050.07.037878545-49
CTCGGGT69350.06.723685720-24
AGGTCCT72600.06.46238845-49
CTAGCAC11200.06.296318550-54
GGGTGGG79800.05.951662525-29
CAGGTCC95850.05.49542245-49
AACACAG100050.05.193064710-14
GGTGGGA97100.05.1580725-29
GTCCTCT86000.05.070563345-49
ACACAGC100100.05.03231210-14
Produced by FastQC (version 0.11.5)