FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15656530
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA110200.09.6684196
ATGGCTC111800.09.5300215
GGCTCAA114100.08.7700997
CTCAAAC122400.08.4695019
TCTGATG146600.07.0375981
GATGGCT157900.06.7022444
GCTCAAA175750.06.4310178
AGTGAGT35106.190021E-95.6285431
GTGAGTA37251.9575054E-75.0249542
Produced by FastQC (version 0.11.5)