FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16442497
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA67550.022.0624645
CAGTGGT72300.021.111984
GTGGTAT99250.015.6686736
GTATCAA104200.015.4079949
AGCAGTG110650.014.05892
GGTATCA114850.013.7911558
TGGTATC119600.012.9424437
CTAGGAG7802.0939842E-712.003222
ACTAGGA8454.3188265E-811.98549651
GCAGTGG133450.011.710863
AAGCAGT148300.010.92676451
Produced by FastQC (version 0.11.5)