FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16442497
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA105700.013.689846
ATGGCTC113800.012.588915
ACTAGGA10654.1836756E-1112.3655611
CTCAAAC119650.012.153919
CTAGGAG10505.7480065E-1011.6557322
TCTGATG125850.011.3363251
GGCTCAA131500.011.2776557
GATGGCT148450.09.89304354
GCTCAAA187250.07.95840178
CTGATGG233800.06.9589532
CCTCTAG11700.06.15307250-54
TGATGGC263100.05.88298233
CTCTAGG9707.2759576E-125.343657550-54
Produced by FastQC (version 0.11.5)