FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15601141
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGAC10350.07.512171120-124
ACCACTA60100.07.06677778
GAGCACA139750.06.9539489
AGAGCAC147250.06.59967238
CTAGACC14650.06.191772120-124
GATCGGA172650.05.904541
GTCCCTA22802.1886508E-55.6836523
ACACTAT43409.094947E-125.63940248
CACCACT83750.05.41501477
CACTATA46851.4551915E-115.37784059
TCGGAAG198100.05.0514983
CCACTAC81250.05.05011139
Produced by FastQC (version 0.11.5)