FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15601141
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACACA62000.08.4830855
TACACAA75500.07.3479546
ACACTAT48650.06.5161718
ACCACTA56700.06.22638038
GGTACAC84050.06.17354254
CCTAGAC10700.06.054948120-124
CACTATA52150.05.94068869
GATCGGA178850.05.80321651
AACACTA56000.05.78958037
AGGTACA94100.05.6664093
AAGGTAC105650.05.6582322
ACACAAA107250.05.57575137
TCGGAAG198700.05.29444933
CCACTAC77100.05.13961949
AGAGCGT202050.05.09917358
Produced by FastQC (version 0.11.5)