FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14696327
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA167100.010.8989779
AGAGCAC179300.09.9966578
GATCGGA179400.09.9076641
TCGGAAG203400.09.0250913
ATCGGAA232000.08.006232
AAGAGCA239100.07.76740467
GAAGAGC282750.06.6955916
GGAAGAG293650.06.64316565
CGGAAGA317000.06.08571054
AGTCACA67650.05.34183725-29
CTCGTAT72500.05.16333240-44
Produced by FastQC (version 0.11.5)