FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17080258
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT90950.040.1370054
AGTGGTA93000.039.0090375
AGCAGTG128450.028.7715572
GTGGTAT135250.027.1425446
GCAGTGG142000.025.9244843
TGGTATC154200.023.9008547
GGTATCA162650.022.6591558
GTATCAA168050.022.3167449
AAGCAGT188250.020.3808771
TCTTGGG108500.07.314628635-39
GCAGAGT131700.06.329259415-19
CAACGCA145250.05.86766310-14
Produced by FastQC (version 0.11.5)