FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14536900
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA118600.06.6829371
GCTAGGG6755.7843863E-105.973424470-74
GAGCACA148400.05.67498879
TCGGAAG142750.05.30173
ATCGGAA163800.05.1044162
TCCTCTC101950.05.0840075
CTAGGGC7758.8599336E-85.01685170-74
Produced by FastQC (version 0.11.5)