FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16040518
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA86200.014.1955065
CAGTGGT92250.013.654664
GTATCAA118850.011.143669
GTGGTAT123250.010.7458336
AGCAGTG117000.010.717952
AAGCAGT130250.010.0064181
GGTATCA145550.09.2972578
GCAGTGG158250.08.1872493
GGGCTAG8400.00735707077.7120963
TGGTATC182550.07.45228057
TAGGTAC38201.8189894E-126.2900471
Produced by FastQC (version 0.11.5)