FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15163308
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTTAG46800.010.9204463
CTCAAAC120950.010.7129459
GGCTCAA120400.010.6423067
ATGGCTC138300.09.1603025
TGGCTCA141950.09.1280486
CTTAGTC37150.08.3316115
TAGTCAC37300.07.91256437
GCTCAAA171800.07.5420888
CTAGTCG13700.07.4614882120-124
TCTGATG176750.06.8857141
GATGGCT211450.06.80848074
AGCACTA101850.06.50233039
ACTTAGT52750.06.2771614
TTAGTCA56250.06.14270266
GCTAGTC17800.05.823716120-124
ACACTAG22450.05.772176770-74
TTACTTA98700.05.7665882
CAGCACT125350.05.57044178
TCTAGTC17300.05.40979470-74
CTCTAGG11000.05.36607250-54
Produced by FastQC (version 0.11.5)